ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9JYF4_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9JYF4_nD1

Q9JYF4_nD1

UID: 004398917

AlphaFold

Range: 1-245
AlphaFold: AF-Q9JYF4
UniProt: Q9JYF4 (all domains)
Gene: rsmJ

Protein: Ribosomal RNA small subunit methyltransferase J (EC 2.1.1.242) (16S rRNA m2G1516 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SAM_MT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilySAM_MT(2003.1.5.38)

Pfam Families

Putative SAM-dependent methyltransferase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q9JYF4 UniProt: Q9JYF4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-245