ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q0KJL4_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0KJL4_nD1

Q0KJL4_nD1

UID: 004404066

AlphaFold

Range: 11-170
AlphaFold: AF-Q0KJL4
UniProt: Q0KJL4 (all domains)
Gene: ligU

Protein: (4E)-oxalomesaconate Delta-isomerase (OMA isomerase) (EC 5.3.3.-) (1,3-allylic isomerase LigU)

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupDiaminopimelate epimerase-like(286)

HH-groupDiaminopimelate epimerase-like(286.1)

TT-groupDiaminopimelate epimerase-like(286.1.1)

FFamilyPrpF(286.1.1.3)

Pfam Families

PrpF protein

ClanCL0288DAP_epimerase

External Links

AlphaFold DB: Q0KJL4 UniProt: Q0KJL4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-170