ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

B5YJ35_nD1 - ECOD Domain | ECOD

ECOD/Domains/B5YJ35_nD1

B5YJ35_nD1

UID: 004406284

AlphaFold

Range: 11-80
AlphaFold: AF-B5YJ35
UniProt: B5YJ35 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb6 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRPB6/omega subunit-like(152)

HH-groupRPB6/omega subunit-like(152.1)

TT-groupRNA polymerase omega subunit(152.1.2)

FFamilyRNA_pol_Rpb6(152.1.2.1)

Pfam Families

PF01192RNA_pol_Rpb6

RNA polymerase Rpb6

External Links

AlphaFold DB: B5YJ35 UniProt: B5YJ35

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-80