ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pdlB1 - ECOD Domain | ECOD

ECOD/Domains/e1pdlB1

e1pdlB1

UID: 000441015

PDB

Range: B:130-345
PDB: 1PDL chain B(all domains)
UniProt: P16009 (all domains)
Gene: 5

Molecule: Pre-baseplate central spike protein Gp5 (Pre-Gp5) (Peptidoglycan hydrolase gp5) (EC 3.2.1.17) [Cleaved into: Baseplate central spike protein Gp5* (Mature Gp5); Gp5C]

3D Structure

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Related Domains

Browse other domains in Phage_lysozyme,Gp5_OB →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilyPhage_lysozyme,Gp5_OB(235.1.1.7)

Pfam Families

PF00959Phage_lysozyme

Phage lysozyme

ClanCL0037Lysozyme

Gp5 N-terminal OB domain

ClanCL0021OB

External Links

ECOD PDB View: 1PDL RCSB PDB: 1PDL PDBe: 1PDL UniProt: P16009

Downloads

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