ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pdlB2 - ECOD Domain | ECOD

ECOD/Domains/e1pdlB2

e1pdlB2

UID: 000441016

PDB

Range: B:341-575
PDB: 1PDL chain B(all domains)
UniProt: P16009 (all domains)
Gene: 5

Molecule: Pre-baseplate central spike protein Gp5 (Pre-Gp5) (Peptidoglycan hydrolase gp5) (EC 3.2.1.17) [Cleaved into: Baseplate central spike protein Gp5* (Mature Gp5); Gp5C]

3D Structure

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Related Domains

Browse other domains in Gp5_C →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupPhage tail fiber protein trimerization domain(79)

HH-groupPhage tail fiber protein trimerization domain(79.1)

TT-groupPhage tail fiber protein trimerization domain(79.1.1)

FFamilyGp5_C(79.1.1.1)

Pfam Families

Gp5 C-terminal repeat (3 copies)

ClanCL0606Phage_fibre

External Links

ECOD PDB View: 1PDL RCSB PDB: 1PDL PDBe: 1PDL UniProt: P16009

Downloads

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