ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pdlB3 - ECOD Domain | ECOD

ECOD/Domains/e1pdlB3

e1pdlB3

UID: 000441017

PDB

Range: B:6-129
PDB: 1PDL chain B(all domains)
UniProt: P16009 (all domains)
Gene: 5

Molecule: Pre-baseplate central spike protein Gp5 (Pre-Gp5) (Peptidoglycan hydrolase gp5) (EC 3.2.1.17) [Cleaved into: Baseplate central spike protein Gp5* (Mature Gp5); Gp5C]

3D Structure

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Related Domains

Browse other domains in Gp5_OB →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupTail-associated lysozyme gp5-N(2.7)

TT-groupTail-associated lysozyme gp5-N(2.7.1)

FFamilyGp5_OB(2.7.1.2)

Pfam Families

Gp5 N-terminal OB domain

ClanCL0021OB

External Links

ECOD PDB View: 1PDL RCSB PDB: 1PDL PDBe: 1PDL UniProt: P16009

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