ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

B1J1F5_nD4 - ECOD Domain | ECOD

ECOD/Domains/B1J1F5_nD4

B1J1F5_nD4

UID: 004416868

AlphaFold

Range: 681-940
AlphaFold: AF-B1J1F5
UniProt: B1J1F5 (all domains)
Gene: rapA

Protein: RNA polymerase-associated protein RapA (EC 3.6.4.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RapA_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupRapA C-terminal domain(3509)

HH-groupRapA C-terminal domain(3509.1)

TT-groupRapA C-terminal domain(3509.1.1)

FFamilyRapA_C(3509.1.1.1)

Pfam Families

RNA polymerase recycling family C-terminal

External Links

AlphaFold DB: B1J1F5 UniProt: B1J1F5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 681-940