ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F3A6_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F3A6_nD1

Q5F3A6_nD1

UID: 004421098

AlphaFold

Range: 1-80
AlphaFold: AF-Q5F3A6
UniProt: Q5F3A6 (all domains)
Gene: YOD1

Protein: Ubiquitin thioesterase OTU1 (EC 3.4.19.12)

3D Structure

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Related Domains

Browse other domains in OTU1_UBXL →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyOTU1_UBXL(221.1.1.70)

Pfam Families

PF21403OTU1_UBXL

OTU1, UBXL domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q5F3A6 UniProt: Q5F3A6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-80