ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5JIR5_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5JIR5_nD3

Q5JIR5_nD3

UID: 004426949

AlphaFold

Range: 146-240
AlphaFold: AF-Q5JIR5
UniProt: Q5JIR5 (all domains)
Gene: rrp4

Protein: Exosome complex component Rrp4

3D Structure

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Related Domains

Browse other domains in KH_6 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupKH-domains(327.11)

TT-groupEukaryotic type KH-domain (KH-domain type I)(327.11.2)

FFamilyKH_6(327.11.2.3)

Pfam Families

KH domain

ClanCL0007KH

External Links

AlphaFold DB: Q5JIR5 UniProt: Q5JIR5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 146-240