ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5HFD1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5HFD1_nD3

Q5HFD1_nD3

UID: 004430565

AlphaFold

Range: 116-290
AlphaFold: AF-Q5HFD1
UniProt: Q5HFD1 (all domains)
Gene: lytH

Protein: Probable cell wall amidase LytH (EC 3.5.1.-)

3D Structure

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Related Domains

Browse other domains in Amidase_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyAmidase_3(2011.1.1.5)

Pfam Families

PF01520Amidase_3

N-acetylmuramoyl-L-alanine amidase

ClanCL0865ZnExoPePases

External Links

AlphaFold DB: Q5HFD1 UniProt: Q5HFD1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-290