ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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A5IRJ1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5IRJ1_nD1

A5IRJ1_nD1

UID: 004430882

AlphaFold

Range: 1-169
AlphaFold: AF-A5IRJ1
UniProt: A5IRJ1 (all domains)

3D Structure

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Related Domains

Browse other domains in 2_5_RNA_ligase2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamily2_5_RNA_ligase2(264.1.1.9)

Pfam Families

PF135632_5_RNA_ligase2

2'-5' RNA ligase superfamily

ClanCL02472H

External Links

AlphaFold DB: A5IRJ1 UniProt: A5IRJ1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-169