ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1w8qD1 - ECOD Domain | ECOD

ECOD/Domains/e1w8qD1

e1w8qD1

UID: 000044310

PDB

Range: D:164-238
PDB: 1W8Q chain D(all domains)
UniProt: P39045 (all domains)
Gene: dac

Molecule: D-alanyl-D-alanine carboxypeptidase (DD-carboxypeptidase) (DD-peptidase) (EC 3.4.16.4) (Penicillin-binding protein) (PBP)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_S13 →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupInserted beta sandwich domain in Dac-like proteins(4334)

HH-groupInserted beta sandwich domain in Dac-like proteins(4334.1)

TT-groupInserted beta sandwich domain in Dac-like proteins(4334.1.1)

FFamilyPeptidase_S13(4334.1.1.1)

Pfam Families

PF02113Peptidase_S13

D-Ala-D-Ala carboxypeptidase 3 (S13) family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 1W8Q RCSB PDB: 1W8Q PDBe: 1W8Q UniProt: P39045

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure