ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5SI12_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5SI12_nD1

Q5SI12_nD1

UID: 004438599

AlphaFold

Range: 6-270
AlphaFold: AF-Q5SI12
UniProt: Q5SI12 (all domains)
Gene: mqnD

Protein: 1,4-dihydroxy-6-naphtoate synthase (EC 4.1.99.29) (Menaquinone biosynthetic enzyme MqnD)

3D Structure

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Related Domains

Browse other domains in VitK2_biosynth →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyVitK2_biosynth(7523.1.1.11)

Pfam Families

PF02621VitK2_biosynth

Menaquinone biosynthesis

ClanCL0177PBP

External Links

AlphaFold DB: Q5SI12 UniProt: Q5SI12

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-270