ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A5F5C5_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5F5C5_nD1

A5F5C5_nD1

UID: 004439235

AlphaFold

Range: 1-55
AlphaFold: AF-A5F5C5
UniProt: A5F5C5 (all domains)
Gene: rapA

Protein: RNA polymerase-associated protein RapA (EC 3.6.4.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Tudor_1_RapA →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyTudor_1_RapA(4.1.1.112)

Pfam Families

PF18339Tudor_1_RapA

RapA N-terminal Tudor like domain 1

ClanCL0010SH3

External Links

AlphaFold DB: A5F5C5 UniProt: A5F5C5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-55