ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P18000_nD2 - ECOD Domain | ECOD

ECOD/Domains/P18000_nD2

P18000_nD2

UID: 004441733

AlphaFold

Range: 86-175
AlphaFold: AF-P18000
UniProt: P18000 (all domains)
Gene: col

Protein: Colicin-E5 (EC 3.1.-.-)

3D Structure

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Related Domains

Browse other domains in Colicin_E5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMicrobial ribonucleases-like(234)

HH-groupColicin D nuclease domain(234.3)

TT-groupColicin D nuclease domain(234.3.1)

FFamilyColicin_E5(234.3.1.2)

Pfam Families

PF12106Colicin_E5

Colicin E5 ribonuclease domain

ClanCL0640Colicin_D_E5

External Links

AlphaFold DB: P18000 UniProt: P18000

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-175