ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6F3J0_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q6F3J0_nD1

Q6F3J0_nD1

UID: 004443827

AlphaFold

Range: 41-245
AlphaFold: AF-Q6F3J0
UniProt: Q6F3J0 (all domains)
Gene: NFKB1

Protein: Nuclear factor NF-kappa-B p105 subunit (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) [Cleaved into: Nuclear factor NF-kappa-B p50 subunit]

3D Structure

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Related Domains

Browse other domains in RHD_DNA_bind →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilyRHD_DNA_bind(11.1.5.3)

Pfam Families

PF00554RHD_DNA_bind

Rel homology DNA-binding domain

ClanCL0073P53-like

External Links

AlphaFold DB: Q6F3J0 UniProt: Q6F3J0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-245