ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O28025_nD2 - ECOD Domain | ECOD

ECOD/Domains/O28025_nD2

O28025_nD2

UID: 004445471

AlphaFold

Range: 156-250
AlphaFold: AF-O28025
UniProt: O28025 (all domains)
Gene: tiaS

Protein: tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS (tRNA(Ile2)-agm2C synthetase) (EC 6.3.4.22) (tRNA(Ile2) agmatidine synthetase)

3D Structure

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Related Domains

Browse other domains in DUF1743 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyDUF1743(304.9.1.14)

Pfam Families

PF08489TiaS_FLD

TiaS FLD domain

ClanCL0221RRM

External Links

AlphaFold DB: O28025 UniProt: O28025

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 156-250