ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5HHM4_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5HHM4_nD3

Q5HHM4_nD3

UID: 004450839

AlphaFold

Range: 86-220
AlphaFold: AF-Q5HHM4
UniProt: Q5HHM4 (all domains)
Gene: nuc

Protein: Thermonuclease (TNase) (EC 3.1.31.1) (Micrococcal nuclease) (Staphylococcal nuclease)

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupStaphylococcal nuclease(2.6)

TT-groupStaphylococcal nuclease(2.6.1)

FFamilySNase(2.6.1.1)

Pfam Families

Staphylococcal nuclease homologue

ClanCL0010SH3

External Links

AlphaFold DB: Q5HHM4 UniProt: Q5HHM4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-220