ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q8FFE0_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8FFE0_nD3

Q8FFE0_nD3

UID: 004454383

AlphaFold

Range: 191-245
AlphaFold: AF-Q8FFE0
UniProt: Q8FFE0 (all domains)
Gene: ypdB

Protein: Transcriptional regulatory protein YpdB

3D Structure

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Related Domains

Browse other domains in LytTR →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupChromo domain-like(4.8)

TT-groupChromo domain-like(4.8.1)

FFamilyLytTR(4.8.1.5)

Pfam Families

LytTr DNA-binding domain

ClanCL0010SH3

External Links

AlphaFold DB: Q8FFE0 UniProt: Q8FFE0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 191-245