ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5F5C5_nD4 - ECOD Domain | ECOD

ECOD/Domains/A5F5C5_nD4

A5F5C5_nD4

UID: 004459332

AlphaFold

Range: 431-680
AlphaFold: AF-A5F5C5
UniProt: A5F5C5 (all domains)
Gene: rapA

Protein: RNA polymerase-associated protein RapA (EC 3.6.4.-)

3D Structure

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Related Domains

Browse other domains in Helicase_C,RapA_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHelicase_C,RapA_C(2004.1.1.31)

Pfam Families

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

RNA polymerase recycling family C-terminal

External Links

AlphaFold DB: A5F5C5 UniProt: A5F5C5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 431-680