ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q8G8D1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8G8D1_nD1

Q8G8D1_nD1

UID: 004462306

AlphaFold

Range: 1-140
AlphaFold: AF-Q8G8D1
UniProt: Q8G8D1 (all domains)

3D Structure

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Related Domains

Browse other domains in Rep_OBD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOrigin of replication-binding domains(304.55)

TT-groupOrigin of replication-binding domains(304.55.1)

FFamilyRep_OBD(304.55.1.3)

Pfam Families

PF01719Rep_OBD

Plasmid replication protein, origin binding domain

ClanCL0169Rep

External Links

AlphaFold DB: Q8G8D1 UniProt: Q8G8D1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-140