ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5R7F5_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5R7F5_nD2

Q5R7F5_nD2

UID: 004479795

AlphaFold

Range: 516-565
AlphaFold: AF-Q5R7F5
UniProt: Q5R7F5 (all domains)
Gene: SEMA6D

Protein: Semaphorin-6D

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrefoil/Plexin domain-like(355)

HH-groupTrefoil/Plexin domain-like(355.1)

TT-groupTrefoil/Plexin domain-like(355.1.1)

FFamilyPSI(355.1.1.2)

Pfam Families

Plexin repeat

ClanCL0630PSI

External Links

AlphaFold DB: Q5R7F5 UniProt: Q5R7F5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 516-565