ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5LIJ5_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5LIJ5_nD3

Q5LIJ5_nD3

UID: 004485985

AlphaFold

Range: 306-444
AlphaFold: AF-Q5LIJ5
UniProt: Q5LIJ5 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Mur_ligase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMurD-like peptide ligases, peptide-binding domain(7570)

HH-groupMurD-like peptide ligases, peptide-binding domain(7570.1)

TT-groupMurD-like peptide ligases, peptide-binding domain(7570.1.1)

FFamilyMur_ligase_C(7570.1.1.1)

Pfam Families

PF02875Mur_ligase_C

Mur ligase, glutamate ligase domain

ClanCL0794Mur_ligase_C_sf

External Links

AlphaFold DB: Q5LIJ5 UniProt: Q5LIJ5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 306-444