ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A5UFH3_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5UFH3_nD1

A5UFH3_nD1

UID: 004487616

AlphaFold

Range: 6-88
AlphaFold: AF-A5UFH3
UniProt: A5UFH3 (all domains)
Gene: rpoZ

Protein: DNA-directed RNA polymerase subunit omega (RNAP omega subunit) (EC 2.7.7.6) (RNA polymerase omega subunit) (Transcriptase subunit omega)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb6 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRPB6/omega subunit-like(152)

HH-groupRPB6/omega subunit-like(152.1)

TT-groupRNA polymerase omega subunit(152.1.2)

FFamilyRNA_pol_Rpb6(152.1.2.1)

Pfam Families

PF01192RNA_pol_Rpb6

RNA polymerase Rpb6

External Links

AlphaFold DB: A5UFH3 UniProt: A5UFH3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-88