ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q1JDE8_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q1JDE8_nD1

Q1JDE8_nD1

UID: 004490738

AlphaFold

Range: 1-90
AlphaFold: AF-Q1JDE8
UniProt: Q1JDE8 (all domains)

3D Structure

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Related Domains

Browse other domains in Mur_ligase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupMurCD/PglD N-terminal domain-like(2003.1.8)

FFamilyMur_ligase(2003.1.8.1)

Pfam Families

PF01225Mur_ligase

Mur ligase family, catalytic domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q1JDE8 UniProt: Q1JDE8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-90