ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5HE87_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5HE87_nD2

Q5HE87_nD2

UID: 004491327

AlphaFold

Range: 281-410
AlphaFold: AF-Q5HE87
UniProt: Q5HE87 (all domains)
Gene: glyA

Protein: Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilySHMT(3016.1.1.5)

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

AlphaFold DB: Q5HE87 UniProt: Q5HE87

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 281-410