ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5M5P1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5M5P1_nD2

Q5M5P1_nD2

UID: 004491758

AlphaFold

Range: 146-400
AlphaFold: AF-Q5M5P1
UniProt: Q5M5P1 (all domains)

3D Structure

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Related Domains

Browse other domains in PolyA_pol_RNAbd,tRNA_NucTran2_2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupPoly A polymerase C-terminal region-like(131.2)

TT-groupPoly A polymerase C-terminal region-like(131.2.1)

FFamilyPolyA_pol_RNAbd,tRNA_NucTran2_2(131.2.1.4)

Pfam Families

PF12627PolyA_pol_RNAbd

Probable RNA and SrmB- binding site of polymerase A

PF13735tRNA_NucTran2_2

tRNA nucleotidyltransferase domain 2 putative

ClanCL0237HD_PDEase

External Links

AlphaFold DB: Q5M5P1 UniProt: Q5M5P1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 146-400