ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q4PDF6_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q4PDF6_nD2

Q4PDF6_nD2

UID: 004498193

AlphaFold

Range: 361-440,466-550
AlphaFold: AF-Q4PDF6
UniProt: Q4PDF6 (all domains)
Gene: SLX1

Protein: Structure-specific endonuclease subunit SLX1 (EC 3.1.-.-)

3D Structure

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Related Domains

Browse other domains in SLX1_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilySLX1_C(376.1.1.37)

Pfam Families

Structure-specific endonuclease subunit SLX1, C-terminal

ClanCL0229RING

External Links

AlphaFold DB: Q4PDF6 UniProt: Q4PDF6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 361-440,466-550