ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A6H5F8_nD1 - ECOD Domain | ECOD

ECOD/Domains/A6H5F8_nD1

A6H5F8_nD1

UID: 004498666

AlphaFold

Range: 6-370
AlphaFold: AF-A6H5F8
UniProt: A6H5F8 (all domains)
Gene: rpoC1

Protein: DNA-directed RNA polymerase subunit beta' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta') (RNA polymerase subunit beta')

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246)

HH-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246.1)

TT-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246.1.1)

FFamilyRNA_pol_Rpb1_1(4246.1.1.2)

Pfam Families

PF04997RNA_pol_Rpb1_1

RNA polymerase Rpb1, domain 1

External Links

AlphaFold DB: A6H5F8 UniProt: A6H5F8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-370