ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q28PD8_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q28PD8_nD1

Q28PD8_nD1

UID: 004499102

AlphaFold

Range: 16-235
AlphaFold: AF-Q28PD8
UniProt: Q28PD8 (all domains)

3D Structure

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Related Domains

Browse other domains in tRNA_Me_trans →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA_Me_trans(2005.1.1.23)

Pfam Families

PF03054tRNA_Me_trans

tRNA methyl transferase HUP domain

ClanCL0039HUP

External Links

AlphaFold DB: Q28PD8 UniProt: Q28PD8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-235