ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5SHZ4_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5SHZ4_nD3

Q5SHZ4_nD3

UID: 004499286

AlphaFold

Range: 401-625
AlphaFold: AF-Q5SHZ4
UniProt: Q5SHZ4 (all domains)
Gene: gyrB

Protein: DNA gyrase subunit B (EC 5.6.2.2)

3D Structure

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Related Domains

Browse other domains in DNA_gyraseB_C,Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyDNA_gyraseB_C,Toprim(2006.1.3.1)

Pfam Families

PF00986DNA_gyraseB_C

DNA gyrase B subunit, carboxyl terminus

Toprim domain

ClanCL0413Toprim-like

External Links

AlphaFold DB: Q5SHZ4 UniProt: Q5SHZ4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 401-625