ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5FVX2_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5FVX2_nD1

A5FVX2_nD1

UID: 004499935

AlphaFold

Range: 6-80
AlphaFold: AF-A5FVX2
UniProt: A5FVX2 (all domains)
Gene: rpoZ

Protein: DNA-directed RNA polymerase subunit omega (RNAP omega subunit) (EC 2.7.7.6) (RNA polymerase omega subunit) (Transcriptase subunit omega)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb6 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRPB6/omega subunit-like(152)

HH-groupRPB6/omega subunit-like(152.1)

TT-groupRNA polymerase omega subunit(152.1.2)

FFamilyRNA_pol_Rpb6(152.1.2.1)

Pfam Families

PF01192RNA_pol_Rpb6

RNA polymerase Rpb6

External Links

AlphaFold DB: A5FVX2 UniProt: A5FVX2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-80