ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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O82881_nD3 - ECOD Domain | ECOD

ECOD/Domains/O82881_nD3

O82881_nD3

UID: 004501075

AlphaFold

Range: 191-345
AlphaFold: AF-O82881
UniProt: O82881 (all domains)
Gene: lsoA

Protein: mRNA endoribonuclease LsoA (EC 3.1.-.-) (Toxin LsoA)

3D Structure

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Related Domains

Browse other domains in RnlA-toxin_DBD →

Classification

AArchitecturealpha bundles(a.7)

XX-groupToxin RnlA C-terminal domain(3783)

HH-groupToxin RnlA C-terminal domain(3783.1)

TT-groupToxin RnlA C-terminal domain(3783.1.1)

FFamilyRnlA-toxin_DBD(3783.1.1.1)

Pfam Families

PF19034RnlA-toxin_DBD

RNase LS, bacterial toxin DBD domain

ClanCL0291KNTase_C

External Links

AlphaFold DB: O82881 UniProt: O82881

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 191-345