ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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P49989_nD3 - ECOD Domain | ECOD

ECOD/Domains/P49989_nD3

P49989_nD3

UID: 004505031

AlphaFold

Range: 296-330,351-435
AlphaFold: AF-P49989
UniProt: P49989 (all domains)

3D Structure

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Related Domains

Browse other domains in Sigma54_DBD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySigma54_DBD(101.1.1.32)

Pfam Families

PF04552Sigma54_DBD

Sigma-54, DNA binding domain

ClanCL0123HTH

External Links

AlphaFold DB: P49989 UniProt: P49989

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 296-330,351-435