ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B4U738_nD11 - ECOD Domain | ECOD

ECOD/Domains/B4U738_nD11

B4U738_nD11

UID: 004510270

AlphaFold

Range: 1006-1050,1256-1280,1396-1563
AlphaFold: AF-B4U738
UniProt: B4U738 (all domains)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_5 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954)

HH-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954.1)

TT-groupcentral helical domain in RNA-polymerase beta-prime subunit(4954.1.1)

FFamilyRNA_pol_Rpb1_5(4954.1.1.1)

Pfam Families

PF04998RNA_pol_Rpb1_5

RNA polymerase Rpb1, domain 5

External Links

AlphaFold DB: B4U738 UniProt: B4U738

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1006-1050,1256-1280,1396-1563