ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5F5M8_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5F5M8_nD1

A5F5M8_nD1

UID: 004520152

AlphaFold

Range: 16-110
AlphaFold: AF-A5F5M8
UniProt: A5F5M8 (all domains)
Gene: murC

Protein: UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) (UDP-N-acetylmuramoyl-L-alanine synthetase)

3D Structure

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Related Domains

Browse other domains in Mur_ligase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupMurCD/PglD N-terminal domain-like(2003.1.8)

FFamilyMur_ligase(2003.1.8.1)

Pfam Families

PF01225Mur_ligase

Mur ligase family, catalytic domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: A5F5M8 UniProt: A5F5M8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-110