ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JJC8_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5JJC8_nD2

Q5JJC8_nD2

UID: 004528205

AlphaFold

Range: 91-295
AlphaFold: AF-Q5JJC8
UniProt: Q5JJC8 (all domains)
Gene: srp54

Protein: Signal recognition particle 54 kDa protein (SRP54) (EC 3.6.5.4)

3D Structure

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Related Domains

Browse other domains in SRP54 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRP54(2004.1.1.43)

Pfam Families

SRP54-type protein, GTPase domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q5JJC8 UniProt: Q5JJC8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 91-295