ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q8FDA1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8FDA1_nD1

Q8FDA1_nD1

UID: 004535330

AlphaFold

Range: 11-250
AlphaFold: AF-Q8FDA1
UniProt: Q8FDA1 (all domains)
Gene: lpoA

Protein: Penicillin-binding protein activator LpoA (PBP activator LpoA)

3D Structure

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Related Domains

Browse other domains in LppC →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyLppC(2007.1.2.7)

Pfam Families

LppC putative lipoprotein

ClanCL0144Periplas_BP

External Links

AlphaFold DB: Q8FDA1 UniProt: Q8FDA1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-250