ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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B5E0H4_nD1 - ECOD Domain | ECOD

ECOD/Domains/B5E0H4_nD1

B5E0H4_nD1

UID: 004540407

AlphaFold

Range: 6-265,301-395
AlphaFold: AF-B5E0H4
UniProt: B5E0H4 (all domains)

3D Structure

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Related Domains

Browse other domains in Smg8_Smg9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySmg8_Smg9(2004.1.1.171)

Pfam Families

PF10220Smg8_Smg9

Smg8_Smg9

External Links

AlphaFold DB: B5E0H4 UniProt: B5E0H4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-265,301-395