ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5QJ60_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5QJ60_nD2

Q5QJ60_nD2

UID: 004544060

AlphaFold

Range: 251-520
AlphaFold: AF-Q5QJ60
UniProt: Q5QJ60 (all domains)

Protein: Berberine bridge enzyme-like Cyn d 4 (60 kDa pollen antigen) (BG60) (Cyn d BG60) (FAD-linked oxidoreductase BG60) (EC 1.-.-.-) (Pollen isoallergen BG60) (allergen Cyn d 4)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyBBE(304.6.1.3)

Pfam Families

Berberine and berberine like

ClanCL0277FAD-oxidase_C

External Links

AlphaFold DB: Q5QJ60 UniProt: Q5QJ60

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 251-520