ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P54548_nD1 - ECOD Domain | ECOD

ECOD/Domains/P54548_nD1

P54548_nD1

UID: 004545536

AlphaFold

Range: 1-305
AlphaFold: AF-P54548
UniProt: P54548 (all domains)
Gene: rnz

Protein: Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)

3D Structure

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Related Domains

Browse other domains in Lactamase_B_2, Anti-Pycsar_Apyc1 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B_2, Anti-Pycsar_Apyc1(247.1.1.29)

Pfam Families

PF12706Lactamase_B_2

Beta-lactamase superfamily domain

ClanCL0381Metallo-HOrase

PF23023Anti-Pycsar_Apyc1

Anti-Pycsar protein Apyc1

ClanCL0381Metallo-HOrase

External Links

AlphaFold DB: P54548 UniProt: P54548

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-305