ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P95493_nD5 - ECOD Domain | ECOD

ECOD/Domains/P95493_nD5

P95493_nD5

UID: 004546351

AlphaFold

Range: 676-735
AlphaFold: AF-P95493
UniProt: P95493 (all domains)
Gene: rgpB

Protein: Gingipain R2 (EC 3.4.22.37) (Arg-gingipain) (Gingipain 2) (RGP-2)

3D Structure

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Related Domains

Browse other domains in Peptidase_M60_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyPeptidase_M60_C(11.1.1.276)

Pfam Families

PF18630Peptidase_M60_C

Peptidase M60 C-terminal domain

ClanCL0159E-set

External Links

AlphaFold DB: P95493 UniProt: P95493

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 676-735