ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B6YWB8_nD1 - ECOD Domain | ECOD

ECOD/Domains/B6YWB8_nD1

B6YWB8_nD1

UID: 004549153

AlphaFold

Range: 1-225
AlphaFold: AF-B6YWB8
UniProt: B6YWB8 (all domains)
Gene: csm1

Protein: CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A) (ssDNase Cas10) (EC 3.1.-.-) (Cyclic oligoadenylate synthase) (EC 2.7.7.-) (ToCsm1)

3D Structure

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Related Domains

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Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupHD-domain/PDEase-like(131.1)

TT-groupHD-domain/PDEase-like(131.1.1)

FFamilyHD(131.1.1.3)

Pfam Families

HD domain

ClanCL0237HD_PDEase

External Links

AlphaFold DB: B6YWB8 UniProt: B6YWB8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-225