ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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B6YXM3_nD1 - ECOD Domain | ECOD

ECOD/Domains/B6YXM3_nD1

B6YXM3_nD1

UID: 004549156

AlphaFold

Range: 1-135
AlphaFold: AF-B6YXM3
UniProt: B6YXM3 (all domains)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L5(882)

HH-groupRibosomal protein L5(882.1)

TT-groupRibosomal protein L5(882.1.1)

FFamilyRNA_binding(882.1.1.4)

Pfam Families

PF01877RNA_binding

RNA binding

External Links

AlphaFold DB: B6YXM3 UniProt: B6YXM3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-135