ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9YDC3_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9YDC3_nD1

Q9YDC3_nD1

UID: 004557453

RepresentativeAlphaFold

Range: 26-260,341-350
AlphaFold: AF-Q9YDC3
UniProt: Q9YDC3 (all domains)

3D Structure

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Related Domains

Browse other domains in TruB_N, DKCLD, TruB_C_2, Pus10_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyTruB_N, DKCLD, TruB_C_2, Pus10_C(304.102.1.9)

Pfam Families

TruB family pseudouridylate synthase (N terminal domain)

ClanCL0649PseudoU_synth

DKCLD (NUC011) domain

ClanCL0649PseudoU_synth

PF16198TruB_C_2

tRNA pseudouridylate synthase B C-terminal domain

ClanCL0649PseudoU_synth

PF21238Pus10_C

Pus10, C-terminal

External Links

AlphaFold DB: Q9YDC3 UniProt: Q9YDC3

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-260,341-350

PseudoU_synth