ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q87DM0_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q87DM0_nD2

Q87DM0_nD2

UID: 004557851

AlphaFold

Range: 211-275
AlphaFold: AF-Q87DM0
UniProt: Q87DM0 (all domains)

3D Structure

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Related Domains

Browse other domains in tRNA_Me_trans_M →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupPRC-barrel domain(4.6)

TT-groupPRC-barrel domain(4.6.1)

FFamilytRNA_Me_trans_M(4.6.1.5)

Pfam Families

PF20259tRNA_Me_trans_M

tRNA methyl transferase PRC-barrel domain

ClanCL0350PRC-barrel

External Links

AlphaFold DB: Q87DM0 UniProt: Q87DM0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 211-275