ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8Z2X8_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8Z2X8_nD1

Q8Z2X8_nD1

UID: 004559921

AlphaFold

Range: 26-130,266-340
AlphaFold: AF-Q8Z2X8
UniProt: Q8Z2X8 (all domains)
Gene: lsrB

Protein: Autoinducer 2-binding protein LsrB (AI-2-binding protein LsrB)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peripla_BP_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_4(2007.1.2.11)

Pfam Families

PF13407Peripla_BP_4

Periplasmic binding protein domain

ClanCL0144Periplas_BP

External Links

AlphaFold DB: Q8Z2X8 UniProt: Q8Z2X8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-130,266-340