ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A5FHX5_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5FHX5_nD1

A5FHX5_nD1

UID: 004560564

AlphaFold

Range: 11-310
AlphaFold: AF-A5FHX5
UniProt: A5FHX5 (all domains)
Gene: rlmF

Protein: Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.181) (23S rRNA mA1618 methyltransferase) (rRNA adenine N-6-methyltransferase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Methyltransf_10 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_10(2003.1.5.54)

Pfam Families

PF05971Methyltransf_10

RNA methyltransferase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: A5FHX5 UniProt: A5FHX5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-310