ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5FJK8_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5FJK8_nD1

A5FJK8_nD1

UID: 004560568

AlphaFold

Range: 6-240
AlphaFold: AF-A5FJK8
UniProt: A5FJK8 (all domains)
Gene: Fjoh_1584

Protein: Geranylgeranylglyceryl phosphate synthase (GGGP synthase) (GGGPS) (EC 2.5.1.41) ((S)-3-O-geranylgeranylglyceryl phosphate synthase) (Phosphoglycerol geranylgeranyltransferase)

3D Structure

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Related Domains

Browse other domains in His_biosynth, PcrB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHis_biosynth, PcrB(2002.1.1.277)

Pfam Families

PF00977His_biosynth

Histidine biosynthesis protein

ClanCL0036TIM_barrel

PcrB family

ClanCL0036TIM_barrel

External Links

AlphaFold DB: A5FJK8 UniProt: A5FJK8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-240