ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q52QI2_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q52QI2_nD3

Q52QI2_nD3

UID: 004571221

AlphaFold

Range: 271-360
AlphaFold: AF-Q52QI2
UniProt: Q52QI2 (all domains)

3D Structure

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Related Domains

Browse other domains in PEG10-RTL1_C-capsid →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyPEG10-RTL1_C-capsid(170.1.1.22)

Pfam Families

PF30901PEG10-RTL1_C-capsid

PEG10/RTL1, C-terminal capsid-like domain

ClanCL0523GAG-polyprotein

External Links

AlphaFold DB: Q52QI2 UniProt: Q52QI2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 271-360